[pycodestyle] Respect isort settings in blank line rules (E3*) (#10096)

## Summary

This PR changes the `E3*` rules to respect the `isort`
`lines-after-imports` and `lines-between-types` settings. Specifically,
the following rules required changing

* `TooManyBlannkLines` : Respects both settings.
* `BlankLinesTopLevel`: Respects `lines-after-imports`. Doesn't need to
respect `lines-between-types` because it only applies to classes and
functions


The downside of this approach is that `isort` and the blank line rules
emit a diagnostic when there are too many blank lines. The fixes aren't
identical, the blank line is less opinionated, but blank lines accepts
the fix of `isort`.

<details>
	<summary>Outdated approach</summary>
Fixes
#10077 (comment)

This PR changes the blank line rules to not enforce the number of blank
lines after imports (top-level) if isort is enabled and leave it to
isort to enforce the right number of lines (depends on the
`isort.lines-after-imports` and `isort.lines-between-types` settings).

The reason to give `isort` precedence over the blank line rules is that
they are configurable. Users that always want to blank lines after
imports can use `isort.lines-after-imports=2` to enforce that
(specifically for imports).

This PR does not fix the incompatibility with the formatter in pyi files
that only uses 0 to 1 blank lines. I'll address this separately.

</details>

## Review
The first commit is a small refactor that simplified implementing the
fix (and makes it easier to reason about what's mutable and what's not).


## Test Plan

I added a new test and verified that it fails with an error that the fix
never converges. I verified the snapshot output after implementing the
fix.

---------

Co-authored-by: Hoël Bagard <[email protected]>

Author: MichaReiser

crates/ruff_linter/resources/test/fixtures/pycodestyle/.editorconfig

@@ -0,0 +1,8 @@
+# These rules test for intentional "odd" formatting. Using a formatter fixes that
+[E{1,2,3}*.py]
+generated_code = true
+ij_formatter_enabled = false
+
+[W*.py]
+generated_code = true
+ij_formatter_enabled = false

crates/ruff_linter/resources/test/fixtures/pycodestyle/E30_isort.py

@@ -0,0 +1,62 @@
+import json
+
+
+
+from typing import Any, Sequence
+
+
+class MissingCommand(TypeError): ...  # noqa: N818
+
+
+class BackendProxy:
+    backend_module: str
+    backend_object: str | None
+    backend: Any
+
+
+if __name__ == "__main__":
+    import abcd
+
+
+    abcd.foo()
+
+def __init__(self, backend_module: str, backend_obj: str | None) -> None: ...
+
+if TYPE_CHECKING:
+    import os
+
+
+
+    from typing_extensions import TypeAlias
+
+
+    abcd.foo()
+
+def __call__(self, name: str, *args: Any, **kwargs: Any) -> Any:
+    ...
+
+if TYPE_CHECKING:
+    from typing_extensions import TypeAlias
+
+def __call__2(self, name: str, *args: Any, **kwargs: Any) -> Any:
+    ...
+
+
+def _exit(self) -> None: ...
+
+
+def _optional_commands(self) -> dict[str, bool]: ...
+
+
+def run(argv: Sequence[str]) -> int: ...
+
+
+def read_line(fd: int = 0) -> bytearray: ...
+
+
+def flush() -> None: ...
+
+
+from typing import Any, Sequence
+
+class MissingCommand(TypeError): ...  # noqa: N818

crates/ruff_linter/src/checkers/tokens.rs

@@ -41,14 +41,7 @@ pub(crate) fn check_tokens(
         Rule::BlankLinesAfterFunctionOrClass,
         Rule::BlankLinesBeforeNestedDefinition,
     ]) {
-        let mut blank_lines_checker = BlankLinesChecker::default();
-        blank_lines_checker.check_lines(
-            tokens,
-            locator,
-            stylist,
-            settings.tab_size,
-            &mut diagnostics,
-        );
+        BlankLinesChecker::new(locator, stylist, settings).check_lines(tokens, &mut diagnostics);
     }
 
     if settings.rules.enabled(Rule::BlanketNOQA) {

crates/ruff_linter/src/rules/pycodestyle/mod.rs

@@ -16,7 +16,7 @@ mod tests {
 
     use crate::line_width::LineLength;
     use crate::registry::Rule;
-    use crate::rules::pycodestyle;
+    use crate::rules::{isort, pycodestyle};
     use crate::settings::types::PreviewMode;
     use crate::test::test_path;
     use crate::{assert_messages, settings};
@@ -138,14 +138,23 @@ mod tests {
         Path::new("E25.py")
     )]
     #[test_case(Rule::MissingWhitespaceAroundParameterEquals, Path::new("E25.py"))]
+    fn logical(rule_code: Rule, path: &Path) -> Result<()> {
+        let snapshot = format!("{}_{}", rule_code.noqa_code(), path.to_string_lossy());
+        let diagnostics = test_path(
+            Path::new("pycodestyle").join(path).as_path(),
+            &settings::LinterSettings::for_rule(rule_code),
+        )?;
+        assert_messages!(snapshot, diagnostics);
+        Ok(())
+    }
+
     #[test_case(Rule::BlankLineBetweenMethods, Path::new("E30.py"))]
     #[test_case(Rule::BlankLinesTopLevel, Path::new("E30.py"))]
     #[test_case(Rule::TooManyBlankLines, Path::new("E30.py"))]
     #[test_case(Rule::BlankLineAfterDecorator, Path::new("E30.py"))]
     #[test_case(Rule::BlankLinesAfterFunctionOrClass, Path::new("E30.py"))]
     #[test_case(Rule::BlankLinesBeforeNestedDefinition, Path::new("E30.py"))]
-
-    fn logical(rule_code: Rule, path: &Path) -> Result<()> {
+    fn blank_lines(rule_code: Rule, path: &Path) -> Result<()> {
         let snapshot = format!("{}_{}", rule_code.noqa_code(), path.to_string_lossy());
         let diagnostics = test_path(
             Path::new("pycodestyle").join(path).as_path(),
@@ -155,6 +164,64 @@ mod tests {
         Ok(())
     }
 
+    /// Tests the compatibility of the blank line top level rule and isort.
+    #[test_case(-1, 0)]
+    #[test_case(1, 1)]
+    #[test_case(0, 0)]
+    #[test_case(4, 4)]
+    fn blank_lines_top_level_isort_compatibility(
+        lines_after_imports: isize,
+        lines_between_types: usize,
+    ) -> Result<()> {
+        let snapshot = format!(
+            "blank_lines_top_level_isort_compatibility-lines-after({lines_after_imports})-between({lines_between_types})"
+        );
+        let diagnostics = test_path(
+            Path::new("pycodestyle").join("E30_isort.py"),
+            &settings::LinterSettings {
+                isort: isort::settings::Settings {
+                    lines_after_imports,
+                    lines_between_types,
+                    ..isort::settings::Settings::default()
+                },
+                ..settings::LinterSettings::for_rules([
+                    Rule::BlankLinesTopLevel,
+                    Rule::UnsortedImports,
+                ])
+            },
+        )?;
+        assert_messages!(snapshot, diagnostics);
+        Ok(())
+    }
+
+    /// Tests the compatibility of the blank line too many lines and isort.
+    #[test_case(-1, 0)]
+    #[test_case(1, 1)]
+    #[test_case(0, 0)]
+    #[test_case(4, 4)]
+    fn too_many_blank_lines_isort_compatibility(
+        lines_after_imports: isize,
+        lines_between_types: usize,
+    ) -> Result<()> {
+        let snapshot = format!("too_many_blank_lines_isort_compatibility-lines-after({lines_after_imports})-between({lines_between_types})");
+        let diagnostics = test_path(
+            Path::new("pycodestyle").join("E30_isort.py"),
+            &settings::LinterSettings {
+                isort: isort::settings::Settings {
+                    lines_after_imports,
+                    lines_between_types,
+                    ..isort::settings::Settings::default()
+                },
+                ..settings::LinterSettings::for_rules([
+                    Rule::TooManyBlankLines,
+                    Rule::UnsortedImports,
+                ])
+            },
+        )?;
+        assert_messages!(snapshot, diagnostics);
+        Ok(())
+    }
+
     #[test]
     fn constant_literals() -> Result<()> {
         let diagnostics = test_path(