forked from data-apis/array-api-extra
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathtesting.py
324 lines (252 loc) · 11.7 KB
/
testing.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
"""
Public testing utilities.
See also _lib._testing for additional private testing utilities.
"""
from __future__ import annotations
import contextlib
from collections.abc import Callable, Iterable, Iterator, Sequence
from functools import wraps
from types import ModuleType
from typing import TYPE_CHECKING, Any, ParamSpec, TypeVar, cast
from ._lib._utils._compat import is_dask_namespace, is_jax_namespace
__all__ = ["lazy_xp_function", "patch_lazy_xp_functions"]
if TYPE_CHECKING: # pragma: no cover
# TODO import override from typing (requires Python >=3.12)
import pytest
from dask.typing import Graph, Key, SchedulerGetCallable
from typing_extensions import override
else:
# Sphinx hacks
SchedulerGetCallable = object
def override(func: object) -> object:
return func
P = ParamSpec("P")
T = TypeVar("T")
_ufuncs_tags: dict[object, dict[str, Any]] = {} # type: ignore[explicit-any]
def lazy_xp_function( # type: ignore[explicit-any]
func: Callable[..., Any],
*,
allow_dask_compute: int = 0,
jax_jit: bool = True,
static_argnums: int | Sequence[int] | None = None,
static_argnames: str | Iterable[str] | None = None,
) -> None: # numpydoc ignore=GL07
"""
Tag a function to be tested on lazy backends.
Tag a function so that when any tests are executed with ``xp=jax.numpy`` the
function is replaced with a jitted version of itself, and when it is executed with
``xp=dask.array`` the function will raise if it attempts to materialize the graph.
This will be later expanded to provide test coverage for other lazy backends.
In order for the tag to be effective, the test or a fixture must call
:func:`patch_lazy_xp_functions`.
Parameters
----------
func : callable
Function to be tested.
allow_dask_compute : int, optional
Number of times `func` is allowed to internally materialize the Dask graph. This
is typically triggered by ``bool()``, ``float()``, or ``np.asarray()``.
Set to 1 if you are aware that `func` converts the input parameters to NumPy and
want to let it do so at least for the time being, knowing that it is going to be
extremely detrimental for performance.
If a test needs values higher than 1 to pass, it is a canary that the conversion
to NumPy/bool/float is happening multiple times, which translates to multiple
computations of the whole graph. Short of making the function fully lazy, you
should at least add explicit calls to ``np.asarray()`` early in the function.
*Note:* the counter of `allow_dask_compute` resets after each call to `func`, so
a test function that invokes `func` multiple times should still work with this
parameter set to 1.
Default: 0, meaning that `func` must be fully lazy and never materialize the
graph.
jax_jit : bool, optional
Set to True to replace `func` with ``jax.jit(func)`` after calling the
:func:`patch_lazy_xp_functions` test helper with ``xp=jax.numpy``. Set to False
if `func` is only compatible with eager (non-jitted) JAX. Default: True.
static_argnums : int | Sequence[int], optional
Passed to jax.jit. Positional arguments to treat as static (compile-time
constant). Default: infer from `static_argnames` using
`inspect.signature(func)`.
static_argnames : str | Iterable[str], optional
Passed to jax.jit. Named arguments to treat as static (compile-time constant).
Default: infer from `static_argnums` using `inspect.signature(func)`.
See Also
--------
patch_lazy_xp_functions : Companion function to call from the test or fixture.
jax.jit : JAX function to compile a function for performance.
Examples
--------
In ``test_mymodule.py``::
from array_api_extra.testing import lazy_xp_function from mymodule import myfunc
lazy_xp_function(myfunc)
def test_myfunc(xp):
a = xp.asarray([1, 2])
# When xp=jax.numpy, this is the same as `b = jax.jit(myfunc)(a)`
# When xp=dask.array, crash on compute() or persist()
b = myfunc(a)
Notes
-----
In order for this tag to be effective, the test function must be imported into the
test module globals without its namespace; alternatively its namespace must be
declared in a ``lazy_xp_modules`` list in the test module globals.
Example 1::
from mymodule import myfunc
lazy_xp_function(myfunc)
def test_myfunc(xp):
x = myfunc(xp.asarray([1, 2]))
Example 2::
import mymodule
lazy_xp_modules = [mymodule]
lazy_xp_function(mymodule.myfunc)
def test_myfunc(xp):
x = mymodule.myfunc(xp.asarray([1, 2]))
A test function can circumvent this monkey-patching system by using a namespace
outside of the two above patterns. You need to sanitize your code to make sure this
only happens intentionally.
Example 1::
import mymodule
from mymodule import myfunc
lazy_xp_function(myfunc)
def test_myfunc(xp):
a = xp.asarray([1, 2])
b = myfunc(a) # This is wrapped when xp=jax.numpy or xp=dask.array
c = mymodule.myfunc(a) # This is not
Example 2::
import mymodule
class naked:
myfunc = mymodule.myfunc
lazy_xp_modules = [mymodule]
lazy_xp_function(mymodule.myfunc)
def test_myfunc(xp):
a = xp.asarray([1, 2])
b = mymodule.myfunc(a) # This is wrapped when xp=jax.numpy or xp=dask.array
c = naked.myfunc(a) # This is not
"""
tags = {
"allow_dask_compute": allow_dask_compute,
"jax_jit": jax_jit,
"static_argnums": static_argnums,
"static_argnames": static_argnames,
}
try:
func._lazy_xp_function = tags # type: ignore[attr-defined] # pylint: disable=protected-access # pyright: ignore[reportFunctionMemberAccess]
except AttributeError: # @cython.vectorize
_ufuncs_tags[func] = tags
def patch_lazy_xp_functions(
request: pytest.FixtureRequest, monkeypatch: pytest.MonkeyPatch, *, xp: ModuleType
) -> None:
"""
Test lazy execution of functions tagged with :func:`lazy_xp_function`.
If ``xp==jax.numpy``, search for all functions which have been tagged with
:func:`lazy_xp_function` in the globals of the module that defines the current test,
as well as in the ``lazy_xp_modules`` list in the globals of the same module,
and wrap them with :func:`jax.jit`. Unwrap them at the end of the test.
If ``xp==dask.array``, wrap the functions with a decorator that disables
``compute()`` and ``persist()`` and ensures that exceptions and warnings are raised
eagerly.
This function should be typically called by your library's `xp` fixture that runs
tests on multiple backends::
@pytest.fixture(params=[numpy, array_api_strict, jax.numpy, dask.array])
def xp(request, monkeypatch):
patch_lazy_xp_functions(request, monkeypatch, xp=request.param)
return request.param
but it can be otherwise be called by the test itself too.
Parameters
----------
request : pytest.FixtureRequest
Pytest fixture, as acquired by the test itself or by one of its fixtures.
monkeypatch : pytest.MonkeyPatch
Pytest fixture, as acquired by the test itself or by one of its fixtures.
xp : array_namespace
Array namespace to be tested.
See Also
--------
lazy_xp_function : Tag a function to be tested on lazy backends.
pytest.FixtureRequest : `request` test function parameter.
"""
mod = cast(ModuleType, request.module)
mods = [mod, *cast(list[ModuleType], getattr(mod, "lazy_xp_modules", []))]
def iter_tagged() -> ( # type: ignore[explicit-any]
Iterator[tuple[ModuleType, str, Callable[..., Any], dict[str, Any]]]
):
for mod in mods:
for name, func in mod.__dict__.items():
tags: dict[str, Any] | None = None # type: ignore[explicit-any]
with contextlib.suppress(AttributeError):
tags = func._lazy_xp_function # pylint: disable=protected-access
if tags is None:
with contextlib.suppress(KeyError, TypeError):
tags = _ufuncs_tags[func]
if tags is not None:
yield mod, name, func, tags
if is_dask_namespace(xp):
for mod, name, func, tags in iter_tagged():
n = tags["allow_dask_compute"]
wrapped = _dask_wrap(func, n)
monkeypatch.setattr(mod, name, wrapped)
elif is_jax_namespace(xp):
import jax
for mod, name, func, tags in iter_tagged():
if tags["jax_jit"]:
# suppress unused-ignore to run mypy in -e lint as well as -e dev
wrapped = cast( # type: ignore[explicit-any]
Callable[..., Any],
jax.jit(
func,
static_argnums=tags["static_argnums"],
static_argnames=tags["static_argnames"],
),
)
monkeypatch.setattr(mod, name, wrapped)
class CountingDaskScheduler(SchedulerGetCallable):
"""
Dask scheduler that counts how many times `dask.compute` is called.
If the number of times exceeds 'max_count', it raises an error.
This is a wrapper around Dask's own 'synchronous' scheduler.
Parameters
----------
max_count : int
Maximum number of allowed calls to `dask.compute`.
msg : str
Assertion to raise when the count exceeds `max_count`.
"""
count: int
max_count: int
msg: str
def __init__(self, max_count: int, msg: str): # numpydoc ignore=GL08
self.count = 0
self.max_count = max_count
self.msg = msg
@override
def __call__(self, dsk: Graph, keys: Sequence[Key] | Key, **kwargs: Any) -> Any: # type: ignore[decorated-any,explicit-any] # numpydoc ignore=GL08
import dask
self.count += 1
# This should yield a nice traceback to the
# offending line in the user's code
assert self.count <= self.max_count, self.msg
return dask.get(dsk, keys, **kwargs) # type: ignore[attr-defined,no-untyped-call] # pyright: ignore[reportPrivateImportUsage]
def _dask_wrap(
func: Callable[P, T], n: int
) -> Callable[P, T]: # numpydoc ignore=PR01,RT01
"""
Wrap `func` to raise if it attempts to call `dask.compute` more than `n` times.
After the function returns, materialize the graph in order to re-raise exceptions.
"""
import dask
func_name = getattr(func, "__name__", str(func))
n_str = f"only up to {n}" if n else "no"
msg = (
f"Called `dask.compute()` or `dask.persist()` {n + 1} times, "
f"but {n_str} calls are allowed. Set "
f"`lazy_xp_function({func_name}, allow_dask_compute={n + 1})` "
"to allow for more (but note that this will harm performance). "
)
@wraps(func)
def wrapper(*args: P.args, **kwargs: P.kwargs) -> T: # numpydoc ignore=GL08
scheduler = CountingDaskScheduler(n, msg)
with dask.config.set({"scheduler": scheduler}): # pyright: ignore[reportPrivateImportUsage]
out = func(*args, **kwargs)
# Block until the graph materializes and reraise exceptions. This allows
# `pytest.raises` and `pytest.warns` to work as expected. Note that this would
# not work on scheduler='distributed', as it would not block.
return dask.persist(out, scheduler="threads")[0] # type: ignore[attr-defined,no-untyped-call,func-returns-value,index] # pyright: ignore[reportPrivateImportUsage]
return wrapper