fix minor typos

Author: ocefpaf

Diff for: Changelog

@@ -22,7 +22,7 @@
 
  version 1.6.5 (tag v1.6.5rel)
 ===============================
- * fix for issue #1271 (mask ignored if bool MA assinged to uint8 var)
+ * fix for issue #1271 (mask ignored if bool MA assigned to uint8 var)
  * include information on specific object when reporting errors from netcdf-c
  * python 3.12 wheels added, support for python 3.7 removed.
 
@@ -341,7 +341,7 @@
  * Fix for auto scaling and masking when _Unsigned attribute set (create
    view as unsigned type after scaling and masking). Issue #671.
  * Always mask values outside valid_min, valid_max (not just when
-   missing_value attribue present).  Issue #672.
+   missing_value attribute present).  Issue #672.
  * Fix setup.py so pip install doesn't fail if cython not installed.
    setuptools >= 18.0 now required for installation (Issue #666).
 
@@ -415,7 +415,7 @@
    reading, a vlen string array attribute is returned as a list of
    strings. To write, use var.setncattr_string("name", ["two", "strings"]).)
  * Fix for issue #596 - julian day calculations wrong for negative years,
-   caused incorrect rountrip num2date(date2num(date)) roundtrip for dates with year
+   caused incorrect roundtrip num2date(date2num(date)) roundtrip for dates with year
    < 0.
  * Make sure negative years work in utime.num2date (issue #596).
  * raise NotImplementedError when trying to pickle Dataset, Variable,
@@ -958,7 +958,7 @@
    lib after the 4.2 release).  Controlled by kwarg 'diskless' to
    netCDF4.Dataset (default False). diskless=True when creating a file
    results in a file that exists only in memory, closing the file
-   makes the data disapper, except if persist=True keyword given in
+   makes the data disappear, except if persist=True keyword given in
    which case it is persisted to a disk file on close.  diskless=True
    when opening a file creates an in-memory copy of the file for faster access.
 
@@ -1196,7 +1196,7 @@ version 0.8.1 (svn revision 744)
 
  * Experimental variable-length (vlen) data type support added.
 
- * changes to accomodate compound types in netcdf-4.1-beta snapshots.
+ * changes to accommodate compound types in netcdf-4.1-beta snapshots.
    Compound types now work correctly for snapshots >= 20090603.
 
  * Added __len__ method and 'size' property to Variable class.
@@ -1207,7 +1207,7 @@ version 0.8.1 (svn revision 744)
 
  * Fixed bug occurring when indexing with a numpy array of length 1.
 
- * Fixed bug that occured when -1 was used as a variable index.
+ * Fixed bug that occurred when -1 was used as a variable index.
 
  * enabled 'shared access' mode for NETCDF3 formatted files (mode='ws',
    'r+s' or 'as'). Writes in shared mode are unbuffered, which can
@@ -1376,7 +1376,7 @@ version 0.7.3 (svn revision 501)
   to work as slice indices.
 
 * (netCDF4_classic only) try to make sure file is not left in 'define mode'
-  when execption is raised.
+  when exception is raised.
 
 * if slicing a variable results in a array with shape (1,), just return
   a scalar (except for compound types).

Diff for: README.md

@@ -15,7 +15,7 @@ For details on the latest updates, see the [Changelog](https://github.com/Unidat
 06/13/2024: Version [1.7.0](https://pypi.python.org/pypi/netCDF4/1.7.0) released. Add support for complex numbers via `auto_complex` keyword to `Dataset` ([PR #1295](https://github.com/Unidata/netcdf4-python/pull/1295))
 
 10/20/2023: Version [1.6.5](https://pypi.python.org/pypi/netCDF4/1.6.5) released. 
-Fix for issue #1271 (mask ignored if bool MA assinged to uint8 var), 
+Fix for issue #1271 (mask ignored if bool MA assigned to uint8 var), 
 support for python 3.12 (removal of python 3.7 support), more
 informative error messages.
 

Diff for: docs/index.html

@@ -289,7 +289,7 @@ <h2 id="dimensions-in-a-netcdf-file">Dimensions in a netCDF file</h2>
 &lt;class 'netCDF4._netCDF4.Dimension'&gt;: name = 'lon', size = 144
 </code></pre>
 <p><code><a title="netCDF4.Dimension" href="#netCDF4.Dimension">Dimension</a></code> names can be changed using the
-<code>Datatset.renameDimension</code> method of a <code><a title="netCDF4.Dataset" href="#netCDF4.Dataset">Dataset</a></code> or
+<code>Dataset.renameDimension</code> method of a <code><a title="netCDF4.Dataset" href="#netCDF4.Dataset">Dataset</a></code> or
 <code><a title="netCDF4.Group" href="#netCDF4.Group">Group</a></code> instance.</p>
 <h2 id="variables-in-a-netcdf-file">Variables in a netCDF file</h2>
 <p>netCDF variables behave much like python multidimensional array objects
@@ -901,7 +901,7 @@ <h2 id="parallel-io">Parallel IO</h2>
 <p>The optional <code>comm</code> keyword may be used to specify a particular
 MPI communicator (<code>MPI_COMM_WORLD</code> is used by default).
 Each process (or rank)
-can now write to the file indepedently.
+can now write to the file independently.
 In this example the process rank is
 written to a different variable index on each task</p>
 <pre><code class="language-python">&gt;&gt;&gt; d = nc.createDimension('dim',4)
@@ -1164,7 +1164,7 @@ <h2 class="section-title" id="header-functions">Functions</h2>
 Will be converted to a array of strings, where each string has a fixed
 length of <code>b.shape[-1]</code> characters.</p>
 <p>optional kwarg <code>encoding</code> can be used to specify character encoding (default
-<code>utf-8</code>). If <code>encoding</code> is 'none' or 'bytes', a <code>numpy.string_</code> btye array is
+<code>utf-8</code>). If <code>encoding</code> is 'none' or 'bytes', a <code>numpy.string_</code> byte array is
 returned.</p>
 <p>returns a numpy string array with datatype <code>'UN'</code> (or <code>'SN'</code>) and shape
 <code>b.shape[:-1]</code> where where <code>N=b.shape[-1]</code>.</p></div>
@@ -2884,7 +2884,7 @@ <h3>Methods</h3>
 The value of <code>_Encoding</code>
 is the unicode encoding that is used to decode the bytes into strings.</p>
 <p>When numpy string data is written to a variable it is converted back to
-indiviual bytes, with the number of bytes in each string equalling the
+individual bytes, with the number of bytes in each string equalling the
 rightmost dimension of the variable.</p>
 <p>The default value of <code><a title="netCDF4.chartostring" href="#netCDF4.chartostring">chartostring()</a></code> is <code>True</code>
 (automatic conversions are performed).</p></div>

Diff for: examples/reading_netCDF.ipynb

@@ -479,7 +479,7 @@
     "### Finding the latitude and longitude indices of 50N, 140W\n",
     "\n",
     "- The `X` and `Y` dimensions don't look like longitudes and latitudes\n",
-    "- Use the auxilary coordinate variables named in the `coordinates` variable attribute, `Latitude` and `Longitude`"
+    "- Use the auxiliary coordinate variables named in the `coordinates` variable attribute, `Latitude` and `Longitude`"
    ]
   },
   {

Diff for: examples/writing_netCDF.ipynb

@@ -710,7 +710,7 @@
     "\n",
     "netCDF version 4 added support for organizing data in hierarchical groups.\n",
     "\n",
-    "- analagous to directories in a filesystem. \n",
+    "- analogous to directories in a filesystem. \n",
     "- Groups serve as containers for variables, dimensions and attributes, as well as other groups. \n",
     "- A `netCDF4.Dataset` creates a special group, called the 'root group', which is similar to the root directory in a unix filesystem. \n",
     "\n",

Diff for: include/membuf.pyx

@@ -12,7 +12,7 @@ cdef memview_fromptr(void *memory, size_t size):
     buf.size = size # size of pointer in bytes
     return memoryview(buf)
 
-# private extension type that implements buffer protocal.
+# private extension type that implements buffer protocol.
 cdef class _MemBuf:
     cdef const void *memory
     cdef size_t size

Diff for: include/netCDF4.pxi

@@ -55,7 +55,7 @@ cdef extern from "netcdf.h":
         NC_NETCDF4 # Use netCDF-4/HDF5 format 
         NC_CLASSIC_MODEL # Enforce strict netcdf-3 rules. 
         # Use these 'mode' flags for both nc_create and nc_open.
-        NC_SHARE # Share updates, limit cacheing 
+        NC_SHARE # Share updates, limit caching 
         # The following flag currently is ignored, but use in
         # nc_open() or nc_create() may someday support use of advisory
         # locking to prevent multiple writers from clobbering a file 
@@ -111,7 +111,7 @@ cdef extern from "netcdf.h":
         NC_FILL
         NC_NOFILL
         # Starting with version 3.6, there are different format netCDF
-        # files. 4.0 instroduces the third one. These defines are only for
+        # files. 4.0 introduces the third one. These defines are only for
         # the nc_set_default_format function.
         NC_FORMAT_CLASSIC 
         NC_FORMAT_64BIT   

Diff for: setup.cfg

@@ -32,7 +32,7 @@ use_ncconfig=True
 # use szip_libdir and szip_incdir.
 #szip_dir = /usr/local
 # if netcdf lib was build statically with HDF4 support,
-# uncomment and set to hdf4 lib (libmfhdf and libdf) nstall location.
+# uncomment and set to hdf4 lib (libmfhdf and libdf) install location.
 # If the libraries and include files are installed in separate locations,
 # use hdf4_libdir and hdf4_incdir.
 #hdf4_dir = /usr/local

Diff for: setup.py

@@ -182,7 +182,7 @@ def extract_version(CYTHON_FNAME):
     HAS_NCCONFIG = False
 
 # make sure USE_NCCONFIG from environment takes
-# precendence over use_ncconfig from setup.cfg (issue #341).
+# precedence over use_ncconfig from setup.cfg (issue #341).
 if use_ncconfig and not USE_NCCONFIG:
     USE_NCCONFIG = use_ncconfig
 elif not USE_NCCONFIG:

Diff for: src/netCDF4/_netCDF4.pyx

@@ -285,7 +285,7 @@ and whether it is unlimited.
 ```
 
 `Dimension` names can be changed using the
-`Datatset.renameDimension` method of a `Dataset` or
+`Dataset.renameDimension` method of a `Dataset` or
 `Group` instance.
 
 ## Variables in a netCDF file
@@ -997,7 +997,7 @@ use the `parallel` keyword to enable parallel access.
 
 The optional `comm` keyword may be used to specify a particular
 MPI communicator (`MPI_COMM_WORLD` is used by default).  Each process (or rank)
-can now write to the file indepedently.  In this example the process rank is
+can now write to the file independently.  In this example the process rank is
 written to a different variable index on each task
 
 ```python
@@ -5625,7 +5625,7 @@ of the the rightmost dimension of the variable).  The value of `_Encoding`
 is the unicode encoding that is used to decode the bytes into strings.
 
 When numpy string data is written to a variable it is converted back to
-indiviual bytes, with the number of bytes in each string equalling the
+individual bytes, with the number of bytes in each string equalling the
 rightmost dimension of the variable.
 
 The default value of `chartostring` is `True`
@@ -6751,7 +6751,7 @@ Will be converted to a array of strings, where each string has a fixed
 length of `b.shape[-1]` characters.
 
 optional kwarg `encoding` can be used to specify character encoding (default
-`utf-8`). If `encoding` is 'none' or 'bytes', a `numpy.string_` btye array is
+`utf-8`). If `encoding` is 'none' or 'bytes', a `numpy.string_` byte array is
 returned.
 
 returns a numpy string array with datatype `'UN'` (or `'SN'`) and shape

Diff for: test/test_alignment.py

@@ -134,7 +134,7 @@ def test_setting_alignment(self):
         for line in h5ls_results.split('\n'):
             if not line.startswith(' '):
                 data_variable = line.split(' ')[0]
-            # only process the data variables we care to inpsect
+            # only process the data variables we care to inspect
             if data_variable not in addresses:
                 continue
             line = line.strip()