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import the datatree code and history
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‎xarray/datatree_/.flake8

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[flake8]
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ignore =
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# whitespace before ':' - doesn't work well with black
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E203
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# module level import not at top of file
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E402
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# line too long - let black worry about that
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E501
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# do not assign a lambda expression, use a def
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E731
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# line break before binary operator
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exclude=
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.eggs
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doc

‎xarray/datatree_/.git_archival.txt

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node: $Format:%H$
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node-date: $Format:%cI$
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describe-name: $Format:%(describe:tags=true)$
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ref-names: $Format:%D$

‎xarray/datatree_/.github/dependabot.yml

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version: 2
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updates:
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- package-ecosystem: pip
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directory: "/"
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schedule:
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interval: daily
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- package-ecosystem: "github-actions"
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directory: "/"
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schedule:
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# Check for updates to GitHub Actions every weekday
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interval: "daily"

‎xarray/datatree_/.github/pull_request_template.md

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<!-- Feel free to remove check-list items aren't relevant to your change -->
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- [ ] Closes #xxxx
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- [ ] Tests added
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- [ ] Passes `pre-commit run --all-files`
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- [ ] New functions/methods are listed in `api.rst`
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- [ ] Changes are summarized in `docs/source/whats-new.rst`

‎xarray/datatree_/.github/workflows/main.yaml

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name: CI
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on:
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push:
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branches:
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- main
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pull_request:
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branches:
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- main
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schedule:
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- cron: "0 0 * * *"
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jobs:
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test:
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name: ${{ matrix.python-version }}-build
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runs-on: ubuntu-latest
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defaults:
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run:
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shell: bash -l {0}
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strategy:
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matrix:
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python-version: ["3.9", "3.10", "3.11", "3.12"]
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steps:
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- uses: actions/checkout@v4
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- name: Create conda environment
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uses: mamba-org/provision-with-micromamba@main
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with:
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cache-downloads: true
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micromamba-version: 'latest'
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environment-file: ci/environment.yml
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extra-specs: |
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python=${{ matrix.python-version }}
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- name: Conda info
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run: conda info
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- name: Install datatree
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run: |
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python -m pip install -e . --no-deps --force-reinstall
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- name: Conda list
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run: conda list
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- name: Running Tests
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run: |
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python -m pytest --cov=./ --cov-report=xml --verbose
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- name: Upload code coverage to Codecov
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uses: codecov/[email protected]
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with:
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file: ./coverage.xml
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flags: unittests
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env_vars: OS,PYTHON
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name: codecov-umbrella
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fail_ci_if_error: false
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test-upstream:
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name: ${{ matrix.python-version }}-dev-build
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runs-on: ubuntu-latest
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defaults:
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run:
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shell: bash -l {0}
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strategy:
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matrix:
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python-version: ["3.9", "3.10", "3.11", "3.12"]
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steps:
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- uses: actions/checkout@v4
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- name: Create conda environment
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uses: mamba-org/provision-with-micromamba@main
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with:
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cache-downloads: true
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micromamba-version: 'latest'
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environment-file: ci/environment.yml
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extra-specs: |
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python=${{ matrix.python-version }}
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- name: Conda info
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run: conda info
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- name: Install dev reqs
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run: |
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python -m pip install --no-deps --upgrade \
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git+https://github.com/pydata/xarray \
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git+https://github.com/Unidata/netcdf4-python
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python -m pip install -e . --no-deps --force-reinstall
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- name: Conda list
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run: conda list
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- name: Running Tests
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run: |
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python -m pytest --verbose

‎xarray/datatree_/.github/workflows/pypipublish.yaml

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name: Build distribution
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on:
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release:
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types:
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- published
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push:
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branches:
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- main
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pull_request:
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branches:
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- main
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concurrency:
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group: ${{ github.workflow }}-${{ github.ref }}
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cancel-in-progress: true
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jobs:
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build-artifacts:
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runs-on: ubuntu-latest
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if: github.repository == 'xarray-contrib/datatree'
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steps:
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- uses: actions/checkout@v4
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with:
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fetch-depth: 0
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- uses: actions/setup-python@v5
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name: Install Python
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with:
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python-version: 3.9
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- name: Install dependencies
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run: |
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python -m pip install --upgrade pip
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python -m pip install build
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- name: Build tarball and wheels
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run: |
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git clean -xdf
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git restore -SW .
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python -m build --sdist --wheel .
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- uses: actions/upload-artifact@v4
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with:
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name: releases
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path: dist
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test-built-dist:
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needs: build-artifacts
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runs-on: ubuntu-latest
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steps:
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- uses: actions/setup-python@v5
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name: Install Python
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with:
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python-version: '3.10'
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- uses: actions/download-artifact@v4
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with:
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name: releases
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path: dist
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- name: List contents of built dist
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run: |
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ls -ltrh
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ls -ltrh dist
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- name: Verify the built dist/wheel is valid
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run: |
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python -m pip install --upgrade pip
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python -m pip install dist/xarray_datatree*.whl
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python -c "import datatree; print(datatree.__version__)"
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upload-to-pypi:
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needs: test-built-dist
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if: github.event_name == 'release'
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runs-on: ubuntu-latest
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steps:
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- uses: actions/download-artifact@v4
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with:
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name: releases
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path: dist
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- name: Publish package to PyPI
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uses: pypa/[email protected]
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with:
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user: ${{ secrets.PYPI_USERNAME }}
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password: ${{ secrets.PYPI_PASSWORD }}
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verbose: true

‎xarray/datatree_/.gitignore

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# Byte-compiled / optimized / DLL files
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__pycache__/
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*.py[cod]
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*$py.class
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# C extensions
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*.so
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# Distribution / packaging
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.Python
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build/
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develop-eggs/
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dist/
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downloads/
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eggs/
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.eggs/
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lib/
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lib64/
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parts/
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sdist/
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var/
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wheels/
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pip-wheel-metadata/
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share/python-wheels/
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*.egg-info/
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.installed.cfg
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*.egg
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MANIFEST
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# PyInstaller
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# Usually these files are written by a python script from a template
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# before PyInstaller builds the exe, so as to inject date/other infos into it.
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*.manifest
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*.spec
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# Installer logs
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pip-log.txt
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pip-delete-this-directory.txt
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# Unit test / coverage reports
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htmlcov/
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.tox/
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.nox/
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.coverage
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.coverage.*
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.cache
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nosetests.xml
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coverage.xml
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*.cover
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*.py,cover
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.hypothesis/
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.pytest_cache/
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# Translations
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*.mo
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*.pot
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# Django stuff:
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*.log
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local_settings.py
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db.sqlite3
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db.sqlite3-journal
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# Flask stuff:
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instance/
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.webassets-cache
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# Scrapy stuff:
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.scrapy
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# Sphinx documentation
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docs/_build/
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docs/source/generated
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# PyBuilder
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target/
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# Jupyter Notebook
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.ipynb_checkpoints
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# IPython
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profile_default/
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ipython_config.py
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# pyenv
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.python-version
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# pipenv
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# According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
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# However, in case of collaboration, if having platform-specific dependencies or dependencies
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# having no cross-platform support, pipenv may install dependencies that don't work, or not
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# install all needed dependencies.
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#Pipfile.lock
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# PEP 582; used by e.g. github.com/David-OConnor/pyflow
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__pypackages__/
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# Celery stuff
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celerybeat-schedule
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celerybeat.pid
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# SageMath parsed files
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*.sage.py
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# Environments
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.env
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.venv
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env/
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venv/
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ENV/
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env.bak/
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venv.bak/
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# Spyder project settings
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.spyderproject
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.spyproject
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# Rope project settings
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.ropeproject
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# mkdocs documentation
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/site
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# mypy
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.mypy_cache/
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.dmypy.json
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dmypy.json
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# Pyre type checker
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.pyre/
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# version
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_version.py
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.vscode

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