Fix for #397

eric-czech · mergify[bot] · commit 8d5c45d7ce98 · 2020-11-20T18:10:58.000Z
diff --git a/sgkit/stats/association.py b/sgkit/stats/association.py
@@ -98,7 +98,7 @@ def linear_regression(
     # Match to p-values
     # Note: t dist not implemented in Dask so this must be delayed
     P = da.map_blocks(
-        lambda t: 2 * stats.distributions.t.sf(np.abs(T), dof), T, dtype="float64"
+        lambda t: 2 * stats.distributions.t.sf(np.abs(t), dof), T, dtype="float64"
     )
     assert P.shape == (n_loop_covar, n_outcome)
 

Original file line number	Diff line number	Diff line change
`@@ -98,7 +98,7 @@ def linear_regression(`
`98`	`98`	`# Match to p-values`
`99`	`99`	`# Note: t dist not implemented in Dask so this must be delayed`
`100`	`100`	`P = da.map_blocks(`
`101`		`- lambda t: 2 * stats.distributions.t.sf(np.abs(T), dof), T, dtype="float64"`
	`101`	`+ lambda t: 2 * stats.distributions.t.sf(np.abs(t), dof), T, dtype="float64"`
`102`	`102`	`)`
`103`	`103`	`assert P.shape == (n_loop_covar, n_outcome)`
`104`	`104`