Bump the GMT version in CI to 6.4.0 (GenericMappingTools#1990)

Author: seisman

.github/ISSUE_TEMPLATE/bump_gmt_checklist.md

@@ -14,16 +14,23 @@ assignees: ''
 
 <!-- Please add specific checklist items for the tests, xfail pytest markers, and deprecated syntax that need to be updated. -->
 
-**To-Do**:
-- [ ] Bump the minimum required GMT version (1 PR)
+**To-Do for bumping the GMT version in CI**:
+
+- [ ] Bump the GMT version in CI (1 PR)
   - [ ] Update `.github/workflows/cache_data.yaml`
   - [ ] Update `.github/workflows/ci_docs.yml`
   - [ ] Update `.github/workflows/ci_tests.yaml`
-  - [ ] Update `doc/install.rst`
+  - [ ] Update `ci/requirements/docs.yml`
   - [ ] Update `environment.yml`
+- [ ] Fix failing tests (1 or more PRs)
+- [ ] Fix [xfail](https://docs.pytest.org/en/stable/skipping.html#xfail-mark-test-functions-as-expected-to-fail) pytest markers on tests that are now xpass
+
+**To-Do for bumping the minimum required GMT version**:
+
+- [ ] Bump the minimum required GMT version (1 PR)
+  - [ ] Update `doc/install.rst`
   - [ ] Update `required_version` in `pygmt/clib/session.py`
   - [ ] Update `test_get_default` in `pygmt/tests/test_clib.py`
   - [ ] Update compatibility table in `README.rst`
-- [ ] Fix failing tests (1 or more PRs)
 - [ ] Remove [xfail](https://docs.pytest.org/en/stable/skipping.html#xfail-mark-test-functions-as-expected-to-fail) pytest markers on tests that are now xpass
 - [ ] Update deprecated syntax in source code and examples based on the [GMT Changelog](https://docs.generic-mapping-tools.org/latest/changes.html)

.github/workflows/cache_data.yaml

@@ -38,7 +38,7 @@ jobs:
       # Install GMT and other required dependencies from conda-forge
       - name: Install dependencies
         run: |
-          mamba install gmt=6.3.0 numpy pandas xarray netCDF4 packaging \
+          mamba install gmt=6.4.0 numpy pandas xarray netCDF4 packaging \
                         build
 
       # Install the package that we want to test

.github/workflows/ci_docs.yml

@@ -70,7 +70,7 @@ jobs:
       # Install GMT and other required dependencies from conda-forge
       - name: Install dependencies
         run: |
-          mamba install gmt=6.3.0 numpy pandas xarray netCDF4 packaging \
+          mamba install gmt=6.4.0 numpy pandas xarray netCDF4 packaging \
                         build ipython make myst-parser geopandas \
                         sphinx sphinx-copybutton sphinx-design sphinx-gallery sphinx_rtd_theme
 

.github/workflows/ci_tests.yaml

@@ -90,7 +90,7 @@ jobs:
       # Install GMT and other required dependencies from conda-forge
       - name: Install dependencies
         run: |
-          mamba install gmt=6.3.0 numpy=${{ matrix.numpy-version }} \
+          mamba install gmt=6.4.0 numpy=${{ matrix.numpy-version }} \
                         pandas xarray netCDF4 packaging \
                         ${{ matrix.optional-packages }} \
                         build dvc make pytest>=6.0 \

ci/requirements/docs.yml

@@ -5,7 +5,7 @@ channels:
 dependencies:
     # Required dependencies
     - pip
-    - gmt=6.3.0
+    - gmt=6.4.0
     - numpy>=1.20
     - pandas
     - xarray

environment.yml

@@ -5,7 +5,7 @@ channels:
 dependencies:
     # Required dependencies
     - pip
-    - gmt=6.3.0
+    - gmt=6.4.0
     - numpy>=1.20
     - pandas
     - xarray