Map over multiple subtrees (#32)

* pseudocode ideas for generalizing map_over_subtree

* pseudocode for a generalized map_over_subtree (still only one return arg) + a new mapping.py file

* pseudocode for mapping but now multiple return values

* pseudocode for mapping but with multiple return values

* check_isomorphism works and has tests

* cleaned up the mapping tests a bit

* tests for mapping over multiple trees

* incorrect pseudocode attempt to map over multiple subtrees

* small improvements

* fixed test

* zipping of multiple arguments

* passes for mapping over a single tree

* successfully maps over multiple trees

* successfully returns multiple trees

* filled out all tests

* checking types now works for trees with only one node

* improved docstring

Author: TomNicholas

datatree/datatree.py

@@ -424,10 +424,12 @@ def __init__(
                 else:
                     node_path, node_name = "/", path
 
+                relative_path = node_path.replace(self.name, "")
+
                 # Create and set new node
                 new_node = DataNode(name=node_name, data=data)
                 self.set_node(
-                    node_path,
+                    relative_path,
                     new_node,
                     allow_overwrite=False,
                     new_nodes_along_path=True,

datatree/mapping.py

@@ -1,6 +1,8 @@
 import functools
+from itertools import repeat
 
 from anytree.iterators import LevelOrderIter
+from xarray import DataArray, Dataset
 
 from .treenode import TreeNode
 
@@ -43,11 +45,11 @@ def _check_isomorphic(subtree_a, subtree_b, require_names_equal=False):
 
     if not isinstance(subtree_a, TreeNode):
         raise TypeError(
-            f"Argument `subtree_a is not a tree, it is of type {type(subtree_a)}"
+            f"Argument `subtree_a` is not a tree, it is of type {type(subtree_a)}"
         )
     if not isinstance(subtree_b, TreeNode):
         raise TypeError(
-            f"Argument `subtree_b is not a tree, it is of type {type(subtree_b)}"
+            f"Argument `subtree_b` is not a tree, it is of type {type(subtree_b)}"
         )
 
     # Walking nodes in "level-order" fashion means walking down from the root breadth-first.
@@ -83,57 +85,195 @@ def _check_isomorphic(subtree_a, subtree_b, require_names_equal=False):
 
 def map_over_subtree(func):
     """
-    Decorator which turns a function which acts on (and returns) single Datasets into one which acts on DataTrees.
+    Decorator which turns a function which acts on (and returns) Datasets into one which acts on and returns DataTrees.
 
-    Applies a function to every dataset in this subtree, returning a new tree which stores the results.
+    Applies a function to every dataset in one or more subtrees, returning new trees which store the results.
 
-    The function will be applied to any dataset stored in this node, as well as any dataset stored in any of the
-    descendant nodes. The returned tree will have the same structure as the original subtree.
+    The function will be applied to any dataset stored in any of the nodes in the trees. The returned trees will have
+    the same structure as the supplied trees.
 
-    func needs to return a Dataset, DataArray, or None in order to be able to rebuild the subtree after mapping, as each
-    result will be assigned to its respective node of new tree via `DataTree.__setitem__`.
+    `func` needs to return one Datasets, DataArrays, or None in order to be able to rebuild the subtrees after
+    mapping, as each result will be assigned to its respective node of a new tree via `DataTree.__setitem__`. Any
+    returned value that is one of these types will be stacked into a separate tree before returning all of them.
+
+    The trees passed to the resulting function must all be isomorphic to one another. Their nodes need not be named
+    similarly, but all the output trees will have nodes named in the same way as the first tree passed.
 
     Parameters
     ----------
     func : callable
         Function to apply to datasets with signature:
-        `func(node.ds, *args, **kwargs) -> Dataset`.
 
+        `func(*args, **kwargs) -> Union[Dataset, Iterable[Dataset]]`.
+
+        (i.e. func must accept at least one Dataset and return at least one Dataset.)
         Function will not be applied to any nodes without datasets.
     *args : tuple, optional
-        Positional arguments passed on to `func`.
+        Positional arguments passed on to `func`. If DataTrees any data-containing nodes will be converted to Datasets \
+        via .ds .
     **kwargs : Any
-        Keyword arguments passed on to `func`.
+        Keyword arguments passed on to `func`. If DataTrees any data-containing nodes will be converted to Datasets
+        via .ds .
 
     Returns
     -------
     mapped : callable
-        Wrapped function which returns tree created from results of applying ``func`` to the dataset at each node.
+        Wrapped function which returns one or more tree(s) created from results of applying ``func`` to the dataset at
+        each node.
 
     See also
     --------
     DataTree.map_over_subtree
     DataTree.map_over_subtree_inplace
+    DataTree.subtree
     """
 
+    # TODO examples in the docstring
+
+    # TODO inspect function to work out immediately if the wrong number of arguments were passed for it?
+
     @functools.wraps(func)
-    def _map_over_subtree(tree, *args, **kwargs):
+    def _map_over_subtree(*args, **kwargs):
         """Internal function which maps func over every node in tree, returning a tree of the results."""
+        from .datatree import DataTree
+
+        all_tree_inputs = [a for a in args if isinstance(a, DataTree)] + [
+            a for a in kwargs.values() if isinstance(a, DataTree)
+        ]
+
+        if len(all_tree_inputs) > 0:
+            first_tree, *other_trees = all_tree_inputs
+        else:
+            raise TypeError("Must pass at least one tree object")
+
+        for other_tree in other_trees:
+            # isomorphism is transitive so this is enough to guarantee all trees are mutually isomorphic
+            _check_isomorphic(first_tree, other_tree, require_names_equal=False)
+
+        # Walk all trees simultaneously, applying func to all nodes that lie in same position in different trees
+        # We don't know which arguments are DataTrees so we zip all arguments together as iterables
+        # Store tuples of results in a dict because we don't yet know how many trees we need to rebuild to return
+        out_data_objects = {}
+        args_as_tree_length_iterables = [
+            a.subtree if isinstance(a, DataTree) else repeat(a) for a in args
+        ]
+        n_args = len(args_as_tree_length_iterables)
+        kwargs_as_tree_length_iterables = {
+            k: v.subtree if isinstance(v, DataTree) else repeat(v)
+            for k, v in kwargs.items()
+        }
+        for node_of_first_tree, *all_node_args in zip(
+            first_tree.subtree,
+            *args_as_tree_length_iterables,
+            *list(kwargs_as_tree_length_iterables.values()),
+        ):
+            node_args_as_datasets = [
+                a.ds if isinstance(a, DataTree) else a for a in all_node_args[:n_args]
+            ]
+            node_kwargs_as_datasets = dict(
+                zip(
+                    [k for k in kwargs_as_tree_length_iterables.keys()],
+                    [
+                        v.ds if isinstance(v, DataTree) else v
+                        for v in all_node_args[n_args:]
+                    ],
+                )
+            )
 
-        # Recreate and act on root node
-        from .datatree import DataNode
+            # Now we can call func on the data in this particular set of corresponding nodes
+            results = (
+                func(*node_args_as_datasets, **node_kwargs_as_datasets)
+                if node_of_first_tree.has_data
+                else None
+            )
 
-        out_tree = DataNode(name=tree.name, data=tree.ds)
-        if out_tree.has_data:
-            out_tree.ds = func(out_tree.ds, *args, **kwargs)
+            # TODO implement mapping over multiple trees in-place using if conditions from here on?
+            out_data_objects[node_of_first_tree.pathstr] = results
+
+        # Find out how many return values we received
+        num_return_values = _check_all_return_values(out_data_objects)
+
+        # Reconstruct 1+ subtrees from the dict of results, by filling in all nodes of all result trees
+        result_trees = []
+        for i in range(num_return_values):
+            out_tree_contents = {}
+            for n in first_tree.subtree:
+                p = n.pathstr
+                if p in out_data_objects.keys():
+                    if isinstance(out_data_objects[p], tuple):
+                        output_node_data = out_data_objects[p][i]
+                    else:
+                        output_node_data = out_data_objects[p]
+                else:
+                    output_node_data = None
+                out_tree_contents[p] = output_node_data
+
+            new_tree = DataTree(name=first_tree.name, data_objects=out_tree_contents)
+            result_trees.append(new_tree)
+
+        # If only one result then don't wrap it in a tuple
+        if len(result_trees) == 1:
+            return result_trees[0]
+        else:
+            return tuple(result_trees)
 
-        # Act on every other node in the tree, and rebuild from results
-        for node in tree.descendants:
-            # TODO make a proper relative_path method
-            relative_path = node.pathstr.replace(tree.pathstr, "")
-            result = func(node.ds, *args, **kwargs) if node.has_data else None
-            out_tree[relative_path] = result
+    return _map_over_subtree
 
-        return out_tree
 
-    return _map_over_subtree
+def _check_single_set_return_values(path_to_node, obj):
+    """Check types returned from single evaluation of func, and return number of return values received from func."""
+    if isinstance(obj, (Dataset, DataArray)):
+        return 1
+    elif isinstance(obj, tuple):
+        for r in obj:
+            if not isinstance(r, (Dataset, DataArray)):
+                raise TypeError(
+                    f"One of the results of calling func on datasets on the nodes at position {path_to_node} is "
+                    f"of type {type(r)}, not Dataset or DataArray."
+                )
+        return len(obj)
+    else:
+        raise TypeError(
+            f"The result of calling func on the node at position {path_to_node} is of type {type(obj)}, not "
+            f"Dataset or DataArray, nor a tuple of such types."
+        )
+
+
+def _check_all_return_values(returned_objects):
+    """Walk through all values returned by mapping func over subtrees, raising on any invalid or inconsistent types."""
+
+    if all(r is None for r in returned_objects.values()):
+        raise TypeError(
+            "Called supplied function on all nodes but found a return value of None for"
+            "all of them."
+        )
+
+    result_data_objects = [
+        (path_to_node, r)
+        for path_to_node, r in returned_objects.items()
+        if r is not None
+    ]
+
+    if len(result_data_objects) == 1:
+        # Only one node in the tree: no need to check consistency of results between nodes
+        path_to_node, result = result_data_objects[0]
+        num_return_values = _check_single_set_return_values(path_to_node, result)
+    else:
+        prev_path, _ = result_data_objects[0]
+        prev_num_return_values, num_return_values = None, None
+        for path_to_node, obj in result_data_objects[1:]:
+            num_return_values = _check_single_set_return_values(path_to_node, obj)
+
+            if (
+                num_return_values != prev_num_return_values
+                and prev_num_return_values is not None
+            ):
+                raise TypeError(
+                    f"Calling func on the nodes at position {path_to_node} returns {num_return_values} separate return "
+                    f"values, whereas calling func on the nodes at position {prev_path} instead returns "
+                    f"{prev_num_return_values} separate return values."
+                )
+
+            prev_path, prev_num_return_values = path_to_node, num_return_values
+
+    return num_return_values

datatree/tests/test_datatree.py

@@ -8,11 +8,9 @@
 
 
 def assert_tree_equal(dt_a, dt_b):
-    assert dt_a.name == dt_b.name
     assert dt_a.parent is dt_b.parent
 
-    assert dt_a.ds.equals(dt_b.ds)
-    for a, b in zip(dt_a.descendants, dt_b.descendants):
+    for a, b in zip(dt_a.subtree, dt_b.subtree):
         assert a.name == b.name
         assert a.pathstr == b.pathstr
         if a.has_data:
@@ -321,7 +319,6 @@ def test_to_netcdf(self, tmpdir):
         original_dt.to_netcdf(filepath, engine="netcdf4")
 
         roundtrip_dt = open_datatree(filepath)
-
         assert_tree_equal(original_dt, roundtrip_dt)
 
     def test_to_zarr(self, tmpdir):
@@ -332,5 +329,4 @@ def test_to_zarr(self, tmpdir):
         original_dt.to_zarr(filepath)
 
         roundtrip_dt = open_datatree(filepath, engine="zarr")
-
         assert_tree_equal(original_dt, roundtrip_dt)