BioinfoMachineLearning
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bio-diffusion
bio-diffusion PublicA geometry-complete diffusion generative model (GCDM) for 3D molecule generation and optimization (Nature CommsChem)
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DeepInteract
DeepInteract PublicA geometric deep learning pipeline for predicting protein interface contacts. (ICLR 2022)
Repositories
- deep-learning-hpc-project-template Public
A PyTorch Lightning project template adapted for high-performance computing clusters such as Summit and Fugaku
BioinfoMachineLearning/deep-learning-hpc-project-template’s past year of commit activity - MULTICOM_ligand Public
Comprehensive ensembling of protein-ligand structure and affinity prediction methods (CASP16)
BioinfoMachineLearning/MULTICOM_ligand’s past year of commit activity - denoisecryodata Public
The dataset for training machine learning methods to denoise cryo-EM density maps
BioinfoMachineLearning/denoisecryodata’s past year of commit activity - openfold-triton-evoformer Public Forked from vinay-swamy/openfold
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
BioinfoMachineLearning/openfold-triton-evoformer’s past year of commit activity - Cryo2Strut2 Public
The second version of Cryo2Struct for reconstructing protein structures from cryo-EM density maps
BioinfoMachineLearning/Cryo2Strut2’s past year of commit activity
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