chore(deps): update dependency ketcher-standalone to v3.2.0

[renovate]

This PR contains the following updates:

Package	Change	Age	Adoption	Passing	Confidence
ketcher-standalone (source)	3.1.0 -> 3.2.0

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Release Notes

epam/ketcher (ketcher-standalone)

v3.2.0: Ketcher 3.2.0 April 17, 2025

Compare Source

What's Changed

New features

• #​6215 – Introducing the snap to angle and standard bond length for monomers connected via bonds
• #​6252 – Allow creation of antisense chains in sequence mode
• #​6383 – Introduce the creation of DNA antisense chains
• #​6355 – Change attachment points of backbone monomers in automatically created antisense chains
• #​6254 – Update the representation of sense and antisense chains in sequence mode (2/2)
• #​6284 – Long bonds for uneven double stranded sequences in snake and flex modes
• #​6527 – Add ability to pass coordinates to Ketcher addFragment and setMolecule API to position provided structure
• #​6357 – Allow insertion of phosphates (p) from the keyboard in sequence mode
• #​6596 – Update Indigo to 1.30.0 in browser module

Bugfixes and improvements

• #​6219 – Unable to save to HELM hydrogen connection between micromolecule (with AP) and monomer
• #​6005 – Move the dot indicating a modified phosphate in sequence mode
• #​4145 – Implement popup versions of Ketcher (and routing)
• #​5700 – System allow to establish infinit number of bonds from monomer to microstructure
• #​6534 – Adding nucleotide to the last position having phosphate in antisense causes exception: ReferenceError: process is not defined
• #​6402 – Hydrogen bonds misaligned due to antisense strand direction change when opening or pasting a structure in Macro Mode
• #​6464 – Splitting chain with Enter key doesn't work
• #​6425 – Hiding of number indicators while in sync editing mode when the triangle overlaps with the number
• #​6535 – Unable to add nucleoside to the end of sequence if hanging antisense monomer present
• #​6561 – Switching to macromolecules changes CSS in the page
• #​6369 – System doesn't switch Library tab to proper one if user changes typing type using keboard shortcuts
• #​6627 – Fix invisible snapping drawings after switching to micro mode
• #​6621 – Fix monomer snapping wiping monomer labels
• #​6608 – API setMolecule moves molecule off-canvas on second call
• #​6607 – README missing coordinate units for setMolecule and addFragment API methods
• #​6539 – System should add same thing in antisense chain but not connect it with H-bond if it is not nucleotide/nucleoside
• #​6624 – Enter key in single-strand edit mode incorrectly breaks both chains instead of only one
• #​6632 – New sequence appears gray after clearing the canvas in non-sync mode
• #​6631 – Sync mode causes incorrect letter input after adding a monomer in non-sync mode
• #​6606 – Adding nucleotide to the last position having phosphate in antisense works wrong
• #​6531 – System can't add nucleotide between phosphate and nucleotide in antisence chain
• #​6617 – Empty element appears after undoing line deletion in Sequence mode and switching to Flex/Snake mode
• #​6609 – System creates ambiguous RNA nucleotides instead of DNA ones in case of DNA antisense stand creation
• #​6615 – Missing warning message when deleting all hydrogen bonds between two chains
• #​6619 – System doesn't create antisense phosphate if it sistuated to the left from nubleotide
• #​6623 – Sense and antisense chains switch places during editing based on monomer count
• #​6443 – System allow to select single antisense symbol that causes an error if it got deleted
• #​4002 – getSmiles and getSmarts on query feature containing aromatic ring raises an error
• #​6709 – Unable to paste HELM from clipboard to the canvas. System throws an error: Convert error! option manager: Property "sequence-type" not defined
• #​6723 – Forbid moving sequence nodes and snapping by select rectangle tool
• #​6729 – Create RNA/DNA Strand doesn't work for B, K, Y and S ambiguous bases
• #​6750 – Incorrect R1 attachment atom for natural Ribose (R) in the library
• #​6759 – Add pruning of the remaining transient views on clear canvas button click
• #​6795 – Incorrect properties of some monomers in the library
• #​6829 – Add monomers to the library
• #​6786 – Add monomers from HELM Core Library to Ketcher Library

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Additional notes:

• Ketcher 3.2.0 has been built and tested with Indigo version 1.30 (standalone and remote).

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