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@effigies effigies released this 19 Mar 23:15
· 116 commits to master since this release
1.9.0
35badc9

Release Notes

New feature release in the 1.9.x series.

What's Changed

  • FIX: Remove exists=True from fsl.MotionOutliers output that might not exist (https://github.com/n
  • FIX: Improve evaluate_connect_function errors across Python versions (https://github.com/nipy/nip
  • FIX: Changed inheritance of TensorMetricsInputSpec (#3663)
  • FIX: Add cropped files to dcm2niix output (#3609)
  • FIX: Deduplicate dcm2niix output (#3610)
  • FIX: Parse commas in CSV fields (#3637)
  • FIX: MRTrix3 change inputs position for MRTransform (#3611)
  • FIX: Use out_prefix instead of "w" in spm.Normalize12 (#3600)
  • FIX: Fix typo in spm.Normalize12 process (#3599)
  • FIX: DWIPreproc issue (#3596)
  • FIX: DWIPreproc issue (#3596)
  • FIX: Fix bugs with fsl_out=True and lta_out=True (#358
  • FIX: Test failures (#3587)
  • FIX: update merge_imgs input type of dcm2niix Node (#3548)
  • FIX: update sample_random_points and random_seed type of ProbTrackXBaseInputSpec (https://github.
  • FIX: update self.inputs.optimization in outputs for GTMPVC (#3
  • ENH: Support HDF5 (mat 7.3) SPM.mat files (#3650)
  • ENH: FILMGLS gifti output support in surface mode (#3652)
  • ENH: Added available inputs for MRTrix3's 5ttgen (#3658)
  • ENH: Add functions to mrtrix3 interface (#3613)
  • ENH: Update PETsurfer interface (#3602)
  • ENH: Add 'hsvs' option to 5ttgen + mrtransform fix (#3630)
  • ENH: add STC PVC to PETPVC interface (#3634)
  • ENH: Add GenericLabel to ANTS ApplyTransforms. (#3617)
  • ENH: Issue 3553 add mvecs to dcm2niix (#3554)
  • ENH: add contrast outputs for EstimatedModel (#3577)
  • ENH: Issue 3345: Adding FreeSurfer longitudinal interfaces (#3
  • ENH: Enable SPM voxel-based FDR (#3558)
  • REF: Replace deprecated pkgutil.find_loader with importlib.util.find_spec (https://github.com/nip
  • REF: io.open() → open() (#3575)
  • REF: Stop using deprecated import internally (#3561)
  • DOC: Patch doc/conf.py to work with latest ReadTheDocs (#3691)
  • DOC/FIX: Fix wrong name, should be al_ea (#3629)
  • DOC: Fix typos newly found by codespell (#3606)
  • STY: Apply ruff/pycodestyle rules (E) (#3689)
  • STY: Apply ruff rules (RUF) again (#3688)
  • STY: Apply ruff/Pyflakes rules (F) (#3681)
  • STY: Apply ruff/Perflint rules (PERF) again (#3687)
  • STY: Apply ruff/flake8-comprehensions preview rules (C4) (#368
  • STY: Apply ruff/flake8-simplify rules (SIM) (#3676)
  • STY: Apply ruff/flake8-bugbear rules (B) (#3671)
  • STY: Apply ruff/flake8-comprehensions rules (C4) (#3680)
  • STY: Apply ruff/Perflint rules (PERF) (#3674)
  • STY: Apply ruff/flake8-implicit-str-concat rules (ISC) (#3679)
  • STY: Apply ruff/flake8-pie rules (PIE) (#3678)
  • STY: Apply ruff/flake8-raise rules (RSE) (#3677)
  • STY: Apply ruff/flynt rules (FLY) (#3675)
  • STY: Apply ruff rules (RUF) (#3673)
  • STY: Codespell (#3672)
  • STY: Apply ruff/refurb rules (#3648)
  • STY: Apply ruff/pyupgrade rules (#3647)
  • STY: Adjusted variable names for clarity and codespell false positives (https://github.com/nipy/n
  • STY: Remove duplicated trait in EddyOutputSpec (#3568)
  • STY: Black edits (#1)
  • MNT: Replace deprecated imghdr (#3659)
  • MNT: Use regular ".now" instead of ".utcnow" with UTC zone (#3
  • MNT: Apply assorted repo-review rules (#3682)
  • MNT: Drop traits upper bound (#3685)
  • MNT: Configure dependabot to update GH workflows (#3597)
  • MNT: Replace deprecated locale.getdefaultlocale (#3590)
  • MNT: Require Python 3.8+, auto-upgrade syntax (#3588)
  • CI: Test Python 3.12 support (#3638)
  • CI: Test on Python 3.11 (#3589)
  • CI/FIX: configure codespell, add workflow, typos fixed (#3549)

New Contributors

Full Changelog: 1.8.6...1.9.0

Contributors

beausievers, asmacdo, and 14 other contributors
Assets 2
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