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Consider updating smiles.py to avoid discrepancy between RDKit hybrid… #10167

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…izations and x_map

I encountered an error in training my own model where some SMILEs strings contained atoms classified as SP2D by RDKit. In the end, it turned out there were only 3 such SMILEs strings in my data that were preventing interpretation of thousands of others. This works at least as a temporary solution.

…izations and x_map

I encountered an error in training my own model where some SMILEs strings contained atoms classified as SP2D by RDKit. In the end, it turned out there were only 3 such SMILEs strings in my data that were preventing interpretation of thousands of others.  This works at least as a temporary solution.
@bmp192529 bmp192529 requested a review from wsad1 as a code owner April 3, 2025 23:37
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