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tanujkhattar opened this issue Jun 21, 2023 · 3 comments
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CI fails on master with ModuleNotFoundError for MacOS #6147

tanujkhattar opened this issue Jun 21, 2023 · 3 comments
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@pavoljuhas
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kind/health For CI/testing/release process/refactoring/technical debt items priority/p0 Needs urgent attention and a hotfix release, breaks the majority of users

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@tanujkhattar
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Description of the issue
The issue seems to be related to pandas. See logs from a failed run - https://github.com/quantumlib/Cirq/actions/runs/5328915438/jobs/9654061191?pr=6122

``` Run check/pytest -n auto --ignore=cirq-core/cirq/contrib /Users/runner/hostedtoolcache/Python/3.7.17/x[6](https://github.com/quantumlib/Cirq/actions/runs/5328915438/jobs/9654061191?pr=6122#step:6:7)4/lib/python3.[7](https://github.com/quantumlib/Cirq/actions/runs/5328915438/jobs/9654061191?pr=6122#step:6:8)/site-packages/xdist/dsession.py:70: PytestDeprecationWarning: The hookimpl DSession.pytest_sessionstart uses old-style configuration options (marks or attributes). ============================= test session starts ============================== Please use the pytest.hookimpl(trylast=True) decorator instead platform darwin -- Python 3.7.17, pytest-7.3.2, pluggy-1.0.0 to configure the hooks. Using --randomly-seed=1267634636 See https://docs.pytest.org/en/latest/deprecations.html#configuring-hook-specs-impls-using-markers rootdir: /Users/runner/work/Cirq/Cirq @pytest.mark.trylast configfile: pyproject.toml /Users/runner/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/xdist/dsession.py:93: PytestDeprecationWarning: The hookimpl DSession.pytest_xdist_make_scheduler uses old-style configuration options (marks or attributes). plugins: asyncio-0.21.0, cov-4.1.0, xdist-2.2.1, randomly-3.12.0, forked-1.6.0, anyio-3.7.0 Please use the pytest.hookimpl(trylast=True) decorator instead asyncio: mode=strict to configure the hooks. gw0 I / gw1 I / gw2 I See https://docs.pytest.org/en/latest/deprecations.html#configuring-hook-specs-impls-using-markers gw0 [0] / gw1 [0] / gw2 [0] @pytest.mark.trylast

==================================== ERRORS ====================================
________________________ ERROR collecting test session _________________________
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/importlib/init.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
:1006: in _gcd_import
???
:983: in _find_and_load
???
:953: in _find_and_load_unlocked
???
:219: in _call_with_frames_removed
???
:1006: in _gcd_import
???
:983: in _find_and_load
???
:967: in _find_and_load_unlocked
???
:677: in _load_unlocked
???
:728: in exec_module
???
:219: in _call_with_frames_removed
???
cirq-aqt/cirq_aqt/init.py:19: in
from cirq_aqt.aqt_sampler import AQTSampler, AQTSamplerLocalSimulator
cirq-aqt/cirq_aqt/aqt_sampler.py:33: in
import cirq
cirq-core/cirq/init.py:19: in
from cirq._compat import cirq_debug, with_debug
cirq-core/cirq/_compat.py:31: in
import pandas as pd
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/init.py:50: in
from pandas.core.api import (
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/api.py:48: in
from pandas.core.groupby import (
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/groupby/init.py:1: in
from pandas.core.groupby.generic import (
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/groupby/generic.py:73: in
from pandas.core.frame import DataFrame
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/frame.py:129: in
from pandas.core import (
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/generic.py:122: in
from pandas.core.describe import describe_ndframe
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/describe.py:39: in
from pandas.io.formats.format import format_percentiles
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/io/formats/format.py:99: in
from pandas.io.common import stringify_path
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/io/common.py:4: in
import bz2
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/bz2.py:19: in
from _bz2 import BZ2Compressor, BZ2Decompressor
E ModuleNotFoundError: No module named '_bz2'
________________________ ERROR collecting test session _________________________
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/importlib/init.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
:1006: in _gcd_import
???
:983: in _find_and_load
???
:953: in _find_and_load_unlocked
???
:219: in _call_with_frames_removed
???
:1006: in _gcd_import
???
:983: in _find_and_load
???
:967: in _find_and_load_unlocked
???
:677: in _load_unlocked
???
:728: in exec_module
???
:219: in _call_with_frames_removed
???
cirq-aqt/cirq_aqt/init.py:19: in
from cirq_aqt.aqt_sampler import AQTSampler, AQTSamplerLocalSimulator
cirq-aqt/cirq_aqt/aqt_sampler.py:33: in
import cirq
cirq-core/cirq/init.py:19: in
from cirq._compat import cirq_debug, with_debug
cirq-core/cirq/_compat.py:31: in
import pandas as pd
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/init.py:50: in
from pandas.core.api import (
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/api.py:48: in
from pandas.core.groupby import (
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/groupby/init.py:1: in
from pandas.core.groupby.generic import (
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/groupby/generic.py:73: in
from pandas.core.frame import DataFrame
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/frame.py:129: in
from pandas.core import (
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/generic.py:122: in
from pandas.core.describe import describe_ndframe
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/describe.py:39: in
from pandas.io.formats.format import format_percentiles
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/io/formats/format.py:99: in
from pandas.io.common import stringify_path
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/io/common.py:4: in
import bz2
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/bz2.py:19: in
from _bz2 import BZ2Compressor, BZ2Decompressor
E ModuleNotFoundError: No module named '_bz2'
________________________ ERROR collecting test session _________________________
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/importlib/init.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
:1006: in _gcd_import
???
:983: in _find_and_load
???
:953: in _find_and_load_unlocked
???
:219: in _call_with_frames_removed
???
:1006: in _gcd_import
???
:983: in _find_and_load
???
:967: in _find_and_load_unlocked
???
:677: in _load_unlocked
???
:728: in exec_module
???
:219: in _call_with_frames_removed
???
cirq-aqt/cirq_aqt/init.py:19: in
from cirq_aqt.aqt_sampler import AQTSampler, AQTSamplerLocalSimulator
cirq-aqt/cirq_aqt/aqt_sampler.py:33: in
import cirq
cirq-core/cirq/init.py:19: in
from cirq._compat import cirq_debug, with_debug
cirq-core/cirq/_compat.py:31: in
import pandas as pd
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/init.py:50: in
from pandas.core.api import (
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/api.py:48: in
from pandas.core.groupby import (
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/groupby/init.py:1: in
from pandas.core.groupby.generic import (
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/groupby/generic.py:73: in
from pandas.core.frame import DataFrame
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/frame.py:129: in
from pandas.core import (
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/generic.py:122: in
from pandas.core.describe import describe_ndframe
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/describe.py:39: in
from pandas.io.formats.format import format_percentiles
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/io/formats/format.py:99: in
from pandas.io.common import stringify_path
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/io/common.py:4: in
import bz2
../../../hostedtoolcache/Python/3.7.17/x64/lib/python3.7/bz2.py:19: in
from _bz2 import BZ2Compressor, BZ2Decompressor
E ModuleNotFoundError: No module named '_bz2'
=========================== short test summary info ============================
ERROR - ModuleNotFoundError: No module named '_bz2'
ERROR - ModuleNotFoundError: No module named '_bz2'
ERROR - ModuleNotFoundError: No module named '_bz2'
============================== 3 errors in 5.83s ===============================
Error: Process completed with exit code 1.

</details>
**Cirq version**
1.2.0.dev
@tanujkhattar tanujkhattar added kind/health For CI/testing/release process/refactoring/technical debt items priority/p0 Needs urgent attention and a hotfix release, breaks the majority of users labels Jun 21, 2023
@pavoljuhas pavoljuhas mentioned this issue Jun 21, 2023
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@pavoljuhas
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Recent upgrade of GitHub runner images appears to include broken Python 3.7.17, where
python -c 'import bz2' fails with the same ModuleNotFoundError exception as above.

Reported as actions/runner-images#7764

pavoljuhas added a commit to pavoljuhas/Cirq that referenced this issue Jun 21, 2023
@pavoljuhas
Disable CI unit tests for MacOS Python 3.7
8490ca9 
CI seems to provide broken installation.

Temporary workaround for quantumlib#6147
@pavoljuhas pavoljuhas mentioned this issue Jun 21, 2023
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@pavoljuhas
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Another related bug report: actions/setup-python#682

@pavoljuhas pavoljuhas mentioned this issue Jun 21, 2023
Merged
@pavoljuhas
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Fixed by #6151

@pavoljuhas pavoljuhas mentioned this issue Jun 21, 2023
Merged
pavoljuhas added a commit that referenced this issue Jun 21, 2023
@pavoljuhas
CI - update GitHub actions (#6153)
b337659 
Use the latest versions of GitHub actions, namely

- update actions/checkout@v2 --> v3
- update actions/setup-python@v1 --> v4

Related to #6147
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