bench: refactor random number generation in `stats/base/dists/studentized-range` #5175

hrshya · 2025-02-10T16:15:18Z

type: pre_push_report
description: Results of running various checks prior to pushing changes. report:

task: run_javascript_examples status: na
task: run_c_examples status: na
task: run_cpp_examples status: na
task: run_javascript_readme_examples status: na
task: run_c_benchmarks status: na
task: run_cpp_benchmarks status: na
task: run_fortran_benchmarks status: na
task: run_javascript_benchmarks status: na
task: run_julia_benchmarks status: na
task: run_python_benchmarks status: na
task: run_r_benchmarks status: na
task: run_javascript_tests status: na ---

Resolves #4987

Description

What is the purpose of this pull request?

This pull request:

Fix the random number generation operation by moving it out of the benchmarking loops and initializing it beforehand to avoid interfering with the results. [RFC]: Refactor random number generation in JS benchmarks for stats/base/dists/studentized-range #4987

Related Issues

Does this pull request have any related issues?

This pull request:

performs changes similar to bench: refactor random number generation in stats/base/dists/beta #4837 bench: refactor random number generation in stats/base/dists/hypergeometric #4955

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Please ensure the following tasks are completed before submitting this pull request.

Read, understood, and followed the contributing guidelines.

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--- type: pre_push_report description: Results of running various checks prior to pushing changes. report: - task: run_javascript_examples status: na - task: run_c_examples status: na - task: run_cpp_examples status: na - task: run_javascript_readme_examples status: na - task: run_c_benchmarks status: na - task: run_cpp_benchmarks status: na - task: run_fortran_benchmarks status: na - task: run_javascript_benchmarks status: na - task: run_julia_benchmarks status: na - task: run_python_benchmarks status: na - task: run_r_benchmarks status: na - task: run_javascript_tests status: na ---

stdlib-bot

👋 Hi there! 👋

And thank you for opening your first pull request! We will review it shortly. 🏃 💨

stdlib-bot · 2025-02-10T16:24:43Z

Coverage Report

Package	Statements	Branches	Functions	Lines
stats/base/dists/studentized-range/cdf	$\color{red}649/709$ $\color{green}+91.54\%$	$\color{red}68/85$ $\color{green}+80.00\%$	$\color{green}9/9$ $\color{green}+100.00\%$	$\color{red}649/709$ $\color{green}+91.54\%$
stats/base/dists/studentized-range/quantile	$\color{red}546/580$ $\color{green}+94.14\%$	$\color{red}64/80$ $\color{green}+80.00\%$	$\color{green}5/5$ $\color{green}+100.00\%$	$\color{red}546/580$ $\color{green}+94.14\%$

The above coverage report was generated for the changes in this PR.

anandkaranubc · 2025-02-10T18:40:39Z

lib/node_modules/@stdlib/stats/base/dists/studentized-range/cdf/benchmark/benchmark.js

+	q = uniform( 0.0, 12.0 );
+	r = uniform( 2.0, 20.0 );
+	v = uniform( 2.0, 20.0 );


Here, q, r, and v should each be a Float64Array of length 100 and should be initialized in a loop. Reference PRs will help.

anandkaranubc · 2025-02-10T18:41:16Z

lib/node_modules/@stdlib/stats/base/dists/studentized-range/cdf/benchmark/benchmark.js

+	q = uniform( 0.0, 12.0 );
+	r = uniform( 2.0, 20.0 );
+	v = uniform( 2.0, 20.0 );
+	y = cdf( q, r, v );


This should still remain in the benchmarking loop, as it is the part being benchmarked.

anandkaranubc · 2025-02-10T18:41:29Z

lib/node_modules/@stdlib/stats/base/dists/studentized-range/cdf/benchmark/benchmark.js

+	q = uniform( 0.0, 1.0 );
+	y = mycdf( q );


Same comment as above and applies throughout the PR.

Is this the right approach ?

Yes, considering you are using the correct range for random number generation.

--- type: pre_push_report description: Results of running various checks prior to pushing changes. report: - task: run_javascript_examples status: na - task: run_c_examples status: na - task: run_cpp_examples status: na - task: run_javascript_readme_examples status: na - task: run_c_benchmarks status: na - task: run_cpp_benchmarks status: na - task: run_fortran_benchmarks status: na - task: run_javascript_benchmarks status: na - task: run_julia_benchmarks status: na - task: run_python_benchmarks status: na - task: run_r_benchmarks status: na - task: run_javascript_tests status: na ---

hrshya · 2025-02-11T12:17:52Z

I have made the changes. Can you please review it.

lib/node_modules/@stdlib/stats/base/dists/studentized-range/cdf/benchmark/benchmark.js

lib/node_modules/@stdlib/stats/base/dists/studentized-range/quantile/benchmark/benchmark.js

anandkaranubc · 2025-02-11T16:39:03Z

lib/node_modules/@stdlib/stats/base/dists/studentized-range/quantile/benchmark/benchmark.js

+		p[i] = uniform( 0.0, 1.0 );
+		r[i] = uniform( 2.0, 20.0 );
+		v[i] = uniform( 2.0, 20.0 );


Same comment as above, and applies throughout the PR

…f/benchmark/benchmark.js Co-authored-by: Karan Anand <[email protected]> Signed-off-by: Harsh <[email protected]>

…antile/benchmark/benchmark.js Co-authored-by: Karan Anand <[email protected]> Signed-off-by: Harsh <[email protected]>

Signed-off-by: Harsh <[email protected]>

anandkaranubc

Just some minor changes; the rest of the PR looks ready for merge. Great work!

lib/node_modules/@stdlib/stats/base/dists/studentized-range/quantile/benchmark/benchmark.js

…antile/benchmark/benchmark.js Co-authored-by: Karan Anand <[email protected]> Signed-off-by: Harsh <[email protected]>

hrshya · 2025-02-17T10:47:39Z

Hi @anandkaranubc , Can you pls review it.

anandkaranubc · 2025-02-17T17:41:19Z

Hi @anandkaranubc , Can you pls review it.

On it!

anandkaranubc · 2025-02-17T17:44:06Z

/stdlib lint-autofix

anandkaranubc

Just some minor changes. Rest, the PR looks good!

lib/node_modules/@stdlib/stats/base/dists/studentized-range/cdf/benchmark/benchmark.js

lib/node_modules/@stdlib/stats/base/dists/studentized-range/quantile/benchmark/benchmark.js

anandkaranubc · 2025-02-17T17:56:58Z

lib/node_modules/@stdlib/stats/base/dists/studentized-range/quantile/benchmark/benchmark.js

 var isnan = require( '@stdlib/math/base/assert/is-nan' );
 var pkg = require( './../package.json' ).name;
 var quantile = require( './../lib' );
+var uniform = require('@stdlib/random/base/uniform');
+var Float64Array = require( '@stdlib/array/float64' );


Suggested change

var isnan = require( '@stdlib/math/base/assert/is-nan' );

var pkg = require( './../package.json' ).name;

var quantile = require( './../lib' );

var uniform = require('@stdlib/random/base/uniform');

var Float64Array = require( '@stdlib/array/float64' );

var isnan = require( '@stdlib/math/base/assert/is-nan' );

var uniform = require( '@stdlib/random/base/uniform' );

var Float64Array = require( '@stdlib/array/float64' );

var pkg = require( './../package.json' ).name;

var quantile = require( './../lib' );

Just some rearrangement for consistency.

…f/benchmark/benchmark.js Co-authored-by: Karan Anand <[email protected]> Signed-off-by: Harsh <[email protected]>

…antile/benchmark/benchmark.js Co-authored-by: Karan Anand <[email protected]> Signed-off-by: Harsh <[email protected]>

anandkaranubc · 2025-02-17T18:27:23Z

/stdlib lint-autofix

anandkaranubc · 2025-02-17T18:32:02Z

@hrshya Can you also change the title to:

bench: refactor random number generation in stats/base/dists/studentized-range

Make sure you apply backticks around stats/base/dists/studentized-range

hrshya · 2025-02-17T18:36:19Z

@anandkaranubc Done!

anandkaranubc

Great work! Time to wait for a maintainer to merge this PR :)

stdlib-bot · 2025-02-17T18:46:12Z

PR Commit Message

bench: refactor random number generation in `stats/base/dists/studentized-range`

PR-URL: https://github.com/stdlib-js/stdlib/pull/5175
Closes: https://github.com/stdlib-js/stdlib/issues/4837
Closes: https://github.com/stdlib-js/stdlib/issues/4987
Ref: https://github.com/stdlib-js/stdlib/issues/4955

Co-authored-by: Harsh <[email protected]>
Co-authored-by: Karan Anand <[email protected]>
Co-authored-by: hrshya <[email protected]>
Co-authored-by: stdlib-bot <[email protected]>
Reviewed-by: anandkaranubc <[email protected]>
Signed-off-by: Harsh <[email protected]>

Please review the above commit message and make any necessary adjustments.

Planeshifter · 2025-02-17T18:46:52Z

Thanks @hrshya for PR and @anandkaranubc for review; much appreciated!

stdlib-bot added Statistics Issue or pull request related to statistical functionality. First-time Contributor A pull request from a contributor who has never previously committed to the project repository. Needs Review A pull request which needs code review. labels Feb 10, 2025

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Update lib/node_modules/@stdlib/stats/base/dists/studentized-range/cd…

37789f8

…f/benchmark/benchmark.js Co-authored-by: Karan Anand <[email protected]> Signed-off-by: Harsh <[email protected]>

Update lib/node_modules/@stdlib/stats/base/dists/studentized-range/cd…

9b817c7

…f/benchmark/benchmark.js Co-authored-by: Karan Anand <[email protected]> Signed-off-by: Harsh <[email protected]>

Update lib/node_modules/@stdlib/stats/base/dists/studentized-range/cd…

7098ea1

…f/benchmark/benchmark.js Co-authored-by: Karan Anand <[email protected]> Signed-off-by: Harsh <[email protected]>

Update lib/node_modules/@stdlib/stats/base/dists/studentized-range/qu…

75762e6

…antile/benchmark/benchmark.js Co-authored-by: Karan Anand <[email protected]> Signed-off-by: Harsh <[email protected]>

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Signed-off-by: Harsh <[email protected]>

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…antile/benchmark/benchmark.js Co-authored-by: Karan Anand <[email protected]> Signed-off-by: Harsh <[email protected]>

Update lib/node_modules/@stdlib/stats/base/dists/studentized-range/qu…

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…antile/benchmark/benchmark.js Co-authored-by: Karan Anand <[email protected]> Signed-off-by: Harsh <[email protected]>

hrshya requested a review from anandkaranubc February 13, 2025 09:37

hrshya changed the title ~~Updated benchmarks~~ bench: refactor number generation Feb 13, 2025

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…f/benchmark/benchmark.js Co-authored-by: Karan Anand <[email protected]> Signed-off-by: Harsh <[email protected]>

Update lib/node_modules/@stdlib/stats/base/dists/studentized-range/qu…

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…antile/benchmark/benchmark.js Co-authored-by: Karan Anand <[email protected]> Signed-off-by: Harsh <[email protected]>

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bench: refactor random number generation in `stats/base/dists/studentized-range` #5175

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bench: refactor random number generation in stats/base/dists/studentized-range #5175

bench: refactor random number generation in stats/base/dists/studentized-range #5175

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bench: refactor random number generation in `stats/base/dists/studentized-range` #5175

bench: refactor random number generation in `stats/base/dists/studentized-range` #5175

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